Metadata-Version: 2.1
Name: curtainutils
Version: 0.1.0
Summary: 
Author: Toan Phung
Author-email: toan.phung@proteo.info
Requires-Python: >=3.9,<4.0
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Requires-Dist: click (>=8.1.7,<9.0.0)
Requires-Dist: pandas (>=2.1.0,<3.0.0)
Requires-Dist: uniprotparser (>=1.1.0,<2.0.0)
Description-Content-Type: text/markdown

# CurtainUtils
A utility package for converting different MS output files into a format usable by Curtain (https://curtain.proteo.info) and CurtainPTM (https://curtainptm.proteo.info)

## Installation
The package can be installed using the following command.
`pip install curtainutils`

## Convert MSFragger PTM single site output to CurtainPTM input

```bash
msf-curtainptm -f <MSFragger PTM single site output file> -i <index column with site information> -o <output file> -p <peptide column> -a <fasta file> 
```
