Metadata-Version: 2.1
Name: visualqc
Version: 0.5.4
Summary: Assistive tool for the quality control of neuroimaging data
Home-page: https://github.com/raamana/visualqc
Author: Pradeep Reddy Raamana
Author-email: raamana@gmail.com
License: Apache license
Keywords: visualqc
Platform: UNKNOWN
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Requires-Dist: scipy
Requires-Dist: numpy
Requires-Dist: matplotlib
Requires-Dist: mrivis
Requires-Dist: nibabel
Requires-Dist: scikit-learn
Requires-Dist: pybids
Requires-Dist: nilearn


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==========================================================================================
VisualQC : Assistive tool to ease the quality control workflow of neuroimaging data
==========================================================================================

.. image:: docs/vqc_logo_small.png

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.. image:: docs/visualqc_poster_comprehensive.png

Note: VisualQC employs `release early and release often mechanism <https://en.wikipedia.org/wiki/Release_early,_release_often>`_ to seek user feedback and for thorough testing. Hence you might find some rough edges in docs or examples - please let us know if you do.


* Software Documentation: https://raamana.github.io/visualqc
* `User Manual </docs/VisualQC_TrainingManual_v1p4.pdf>`_
* Free software: Apache 2.0 license
* Pure python package (no licensing issues ala matlab, easy to install and update requiring no other external installations or maintenance)
* Generic design for API that can be adapted for other domains, imaging or medical or otherwise.


Galleries
----------

 * NEW: `Defacing QC <https://raamana.github.io/visualqc/gallery_defacing.html>`_
 * `Freesurfer <https://raamana.github.io/visualqc/gallery_freesurfer.html>`_
 * `Functional MRI <https://raamana.github.io/visualqc/gallery_functional_mri.html>`_
 * `Registration/Alignment quality <https://raamana.github.io/visualqc/gallery_registration_unimodal.html>`_
 * `Structural T1w MRI <https://raamana.github.io/visualqc/gallery_t1_mri.html>`_
 * `Volumetric Segmentation <https://raamana.github.io/visualqc/gallery_segmentation_volumetric.html>`_


Contributions
--------------

`Contributions are welcome. <CONTRIBUTING.rst>`_


Citation
--------------

`Citation details are here <docs/citation.rst>`_

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=======
History
=======


0.5 (2021-03-31)
------------------

* bug fix for defacing - cropping the MRI and defacing images together to avoid differing sizes!


