LICENSE
MANIFEST.in
README.md
README.rst
setup.cfg
setup.py
dms2dfe/__init__.py
dms2dfe/ana0_fastq2dplx.py
dms2dfe/ana0_fastq2sbam.py
dms2dfe/ana0_getfeats.py
dms2dfe/ana1_sam2mutmat.py
dms2dfe/ana2_mutmat2fit.py
dms2dfe/ana3_fit2comparison.py
dms2dfe/ana4_modeller.py
dms2dfe/ana4_plotter.py
dms2dfe/configure.py
dms2dfe/pipeline.py
dms2dfe.egg-info/PKG-INFO
dms2dfe.egg-info/SOURCES.txt
dms2dfe.egg-info/dependency_links.txt
dms2dfe.egg-info/entry_points.txt
dms2dfe.egg-info/requires.txt
dms2dfe.egg-info/top_level.txt
dms2dfe/cfg/barcodes
dms2dfe/cfg/comparison
dms2dfe/cfg/feats_mut
dms2dfe/cfg/feats_pos
dms2dfe/cfg/feats_sub
dms2dfe/cfg/fit
dms2dfe/cfg/info
dms2dfe/cfg/lbls
dms2dfe/cfg/repli
dms2dfe/lib/__init__.py
dms2dfe/lib/convert_seq.py
dms2dfe/lib/data_feats_aas
dms2dfe/lib/data_feats_cds
dms2dfe/lib/deseq2.R
dms2dfe/lib/fit_curve.py
dms2dfe/lib/get_protein_features.py
dms2dfe/lib/global_vars.py
dms2dfe/lib/io_data_files.py
dms2dfe/lib/io_dfs.py
dms2dfe/lib/io_ml.py
dms2dfe/lib/io_ml_data.py
dms2dfe/lib/io_ml_metrics.py
dms2dfe/lib/io_mut_class.py
dms2dfe/lib/io_mut_files.py
dms2dfe/lib/io_nums.py
dms2dfe/lib/io_plot_files.py
dms2dfe/lib/io_plots.py
dms2dfe/lib/io_seq_files.py
dms2dfe/lib/io_stats.py
dms2dfe/lib/io_strs.py
dms2dfe/lib/plot_mut_data.py
dms2dfe/lib/plot_mut_data_dists.py
dms2dfe/lib/plot_mut_data_heatmaps.py
dms2dfe/lib/plot_mut_data_scatter.py
dms2dfe/lib/plot_pdb.py
dms2dfe/lib/plot_pdb_chimera.py
dms2dfe/lib/variant_caller.py
dms2dfe/tmp/__init__.py
dms2dfe/tmp/dssp
dms2dfe/tmp/dssp.fwf
dms2dfe/tmp/info.py
dms2dfe/tmp/plot_pdb_chimera_fhs
test/test_configure.py
test/test_datasets.py