matplotlib
numpy
pandas
pydantic>=2.0.0
loguru
pandera
pybigtools
pyranges1
typer
tqdm
tomli-w

[all]
cooler
capcruncher
quantnado
tomli-w
pytest
pytest-mock
pytest-assume
pre-commit
mkdocs>=1.6.1
mkdocstrings>=1.0.3
mkdocs-literate-nav>=0.6.2
mkdocs-gen-files>=0.6.0
mkdocs-jupyter>=0.25.1
mkdocs-click>=0.9.0
pymdown-extensions>=10.21
mkdocstrings[python]>=1.0.3

[all:python_version < "3.11"]
tomli

[cooler]
cooler
capcruncher

[dev]
pytest
pytest-mock
pytest-assume
pre-commit

[docs]
mkdocs>=1.6.1
mkdocstrings>=1.0.3
mkdocs-literate-nav>=0.6.2
mkdocs-gen-files>=0.6.0
mkdocs-jupyter>=0.25.1
mkdocs-click>=0.9.0
pymdown-extensions>=10.21
tomli-w
mkdocstrings[python]>=1.0.3

[quantnado]
quantnado

[toml]
tomli-w

[toml:python_version < "3.11"]
tomli
