MANIFEST.in
README.rst
setup.py
ProtParCon/__init__.py
ProtParCon/asr.py
ProtParCon/aut.py
ProtParCon/detect.py
ProtParCon/imc.py
ProtParCon/mlt.py
ProtParCon/models.py
ProtParCon/msa.py
ProtParCon/oma.py
ProtParCon/sim.py
ProtParCon/utilities.py
ProtParCon.egg-info/PKG-INFO
ProtParCon.egg-info/SOURCES.txt
ProtParCon.egg-info/dependency_links.txt
ProtParCon.egg-info/entry_points.txt
ProtParCon.egg-info/requires.txt
ProtParCon.egg-info/top_level.txt
tests/README.rst
tests/__init__.py
tests/settings.py
tests/test_asr.py
tests/test_aut.py
tests/test_imc.py
tests/test_mlt.py
tests/test_msa.py
tests/test_sim.py
tests/test_utilities.py
tests/tests.sh
tests/data/README.rst
tests/data/asr/msa.fa
tests/data/asr/tree.newick
tests/data/aut/msa.fa
tests/data/aut/tree.newick
tests/data/aut/trees.newick
tests/data/imc/asr.tsv
tests/data/imc/msa.fa
tests/data/imc/sequence.fa
tests/data/imc/sim.tsv
tests/data/imc/tree.newick
tests/data/mlt/msa.fa
tests/data/msa/sequence.fa
tests/data/sim/asr.tsv
tests/data/sim/msa.fa
tests/data/sim/tree.newick
tests/data/utilities/jtt
tests/data/utilities/msa.fa
tests/data/utilities/msa.phylip
tests/data/utilities/topology.newick
tests/data/utilities/topology_internal.newick
tests/data/utilities/tree.newick
tests/data/utilities/tree_confidence.newick
tests/data/utilities/tree_internal.newick