README.md
pyproject.toml
setup.cfg
setup.py
src/metaerg/__init__.py
src/metaerg/context.py
src/metaerg/functional_gene_configuration.py
src/metaerg/installation.py
src/metaerg/main.py
src/metaerg/registry.py
src/metaerg.egg-info/PKG-INFO
src/metaerg.egg-info/SOURCES.txt
src/metaerg.egg-info/dependency_links.txt
src/metaerg.egg-info/entry_points.txt
src/metaerg.egg-info/requires.txt
src/metaerg.egg-info/top_level.txt
src/metaerg/calculations/__init__.py
src/metaerg/calculations/codon_usage_bias.py
src/metaerg/datatypes/__init__.py
src/metaerg/datatypes/blast.py
src/metaerg/datatypes/fasta.py
src/metaerg/datatypes/gbk.py
src/metaerg/datatypes/gff.py
src/metaerg/datatypes/ncbi_ftp.py
src/metaerg/datatypes/sqlite.py
src/metaerg/html/__init__.py
src/metaerg/html/html_all_genomes.py
src/metaerg/html/html_feature_details.py
src/metaerg/html/html_feature_table.py
src/metaerg/html/html_genome_properties_and_subsystems.py
src/metaerg/run_and_read/__init__.py
src/metaerg/run_and_read/antismash.py
src/metaerg/run_and_read/aragorn.py
src/metaerg/run_and_read/cdd.py
src/metaerg/run_and_read/cmscan.py
src/metaerg/run_and_read/diamond_and_blastn.py
src/metaerg/run_and_read/functional_genes.py
src/metaerg/run_and_read/gene_writer.py
src/metaerg/run_and_read/ltr_harvest.py
src/metaerg/run_and_read/minced.py
src/metaerg/run_and_read/prodigal.py
src/metaerg/run_and_read/repeat_masker.py
src/metaerg/run_and_read/signalp.py
src/metaerg/run_and_read/tmhmm.py
src/metaerg/run_and_read/trf.py
src/metaerg/run_and_read/data/__init__.py
src/metaerg/run_and_read/data/functional_gene_data