Metadata-Version: 2.1
Name: polyclonal
Version: 6.14
Summary: Model mutational escape from polyclonal antibodies.
Home-page: https://github.com/jbloomlab/polyclonal
Download-URL: https://github.com/jbloomlab/polyclonal/tarball/6.14
Author: `the Bloom lab <https://jbloomlab.org>`_
Author-email: jbloom@fredhutch.org
License: GPLv3
Platform: Linux and Mac OS X.
License-File: LICENSE.txt
Requires-Dist: altair>=5.0.0
Requires-Dist: binarymap>=0.7
Requires-Dist: biopython>=1.79
Requires-Dist: frozendict>=2.0.7
Requires-Dist: matplotlib>=3.1
Requires-Dist: natsort>=8.0
Requires-Dist: numpy>=1.17
Requires-Dist: pandas>=1.5
Requires-Dist: pyarrow
Requires-Dist: requests
Requires-Dist: scipy>=1.7.1

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polyclonal
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.. image:: https://img.shields.io/pypi/v/polyclonal.svg
        :target: https://pypi.python.org/pypi/polyclonal

.. image:: https://github.com/jbloomlab/polyclonal/actions/workflows/test.yaml/badge.svg
        :target: https://github.com/jbloomlab/polyclonal/actions/workflows/test.yaml

.. image:: https://img.shields.io/badge/code%20style-black-000000.svg
        :target: https://github.com/psf/black

.. image:: https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/charliermarsh/ruff/main/assets/badge/v2.json
        :target: https://github.com/astral-sh/ruff

Model mutational escape from polyclonal antibodies using deep mutational scanning data.

``polyclonal`` is a Python package written by `the Bloom lab <https://jbloomlab.org>`_.

See `Yu et al (2022) <https://doi.org/10.1093/ve/veac110>`_ for an explanation of the approach implemented in ``polyclonal``.

The source code is `on GitHub <https://github.com/jbloomlab/polyclonal>`_.

See the `polyclonal documentation <https://jbloomlab.github.io/polyclonal>`_ for details on how to install and use ``polyclonal``.

To contribute to this package, read the instructions in `CONTRIBUTING.rst <CONTRIBUTING.rst>`_.
