README.md
setup.cfg
setup.py
ms2query/__init__.py
ms2query/__version__.py
ms2query/clean_and_filter_spectra.py
ms2query/ms2library.py
ms2query/old_query_from_sqlite_functions.py
ms2query/query_from_sqlite_database.py
ms2query/results_table.py
ms2query/run_ms2query.py
ms2query/utils.py
ms2query.egg-info/PKG-INFO
ms2query.egg-info/SOURCES.txt
ms2query.egg-info/dependency_links.txt
ms2query.egg-info/entry_points.txt
ms2query.egg-info/not-zip-safe
ms2query.egg-info/requires.txt
ms2query.egg-info/top_level.txt
ms2query/benchmarking/__init__.py
ms2query/benchmarking/collect_test_data_results.py
ms2query/benchmarking/create_accuracy_vs_recall_plot.py
ms2query/benchmarking/k_fold_cross_validation.py
ms2query/benchmarking/visualize_mass_distribution.py
ms2query/benchmarking/visualize_tanimoto_score_distribution.py
ms2query/create_new_library/__init__.py
ms2query/create_new_library/calculate_tanimoto_scores.py
ms2query/create_new_library/create_sqlite_database.py
ms2query/create_new_library/library_files_creator.py
ms2query/create_new_library/split_data_for_training.py
ms2query/create_new_library/train_models.py
ms2query/create_new_library/train_ms2deepscore.py
ms2query/create_new_library/train_ms2query_model.py
tests/__init__.py
tests/test_calculate_tanimoto_scores.py
tests/test_clean_and_filter_spectra.py
tests/test_collect_test_data_results.py
tests/test_library_files_creator.py
tests/test_ms2library.py
tests/test_results_table.py
tests/test_run_ms2query.py
tests/test_split_data_for_training.py
tests/test_sqlite.py
tests/test_train_models.py
tests/test_train_ms2deepscore.py
tests/test_train_ms2query_model.py
tests/test_use_files_without_spectrum_id.py
tests/test_utils.py