README.md
setup.py
./cathpy/core/scripts/__init__.py
./cathpy/core/scripts/cath_cli.py
cathpy.egg-info/PKG-INFO
cathpy.egg-info/SOURCES.txt
cathpy.egg-info/dependency_links.txt
cathpy.egg-info/entry_points.txt
cathpy.egg-info/requires.txt
cathpy.egg-info/top_level.txt
cathpy/core/__init__.py
cathpy/core/align.py
cathpy/core/datafiles.py
cathpy/core/error.py
cathpy/core/funfhmmer.py
cathpy/core/models.py
cathpy/core/release.py
cathpy/core/ssap.py
cathpy/core/tasks.py
cathpy/core/tests.py
cathpy/core/util.py
cathpy/core/version.py
cathpy/core/scripts/__init__.py
cathpy/core/scripts/cath_cli.py
cathpy/core/tools/GroupSim/group_sim_sdp.py
cathpy/core/tools/GroupSim/group_sim_sdp_without_cons.py
scripts/cath-align-scorecons
scripts/cath-align-summary
scripts/cath-funfhmmer-api
scripts/cath-sc-merge-alignment