.gitignore
LICENSE
README.rst
old_readme.md
requirements.txt
setup.py
docs/Makefile
docs/make.bat
docs/_static/Schema-Overview-v2.png
docs/_static/Schema-Overview-v3.png
docs/_static/Schema-webpage-logo-1.png
docs/_static/Schema-webpage-logo-2-blue.png
docs/_templates/footer.html
docs/source/conf.py
docs/source/datasets.rst
docs/source/index.rst
docs/source/installation.rst
docs/source/overview.rst
docs/source/references.rst
docs/source/_static/umap_flybrain_regular_r3.png
docs/source/_static/umap_flybrain_schema0.99_r3.png
docs/source/api/index.rst
docs/source/recipes/index.rst
docs/source/visualization/index.rst
examples/Schema_demo.ipynb
examples/fly_brain/config.py
examples/fly_brain/fly_brain.py
examples/fly_brain/process.py
examples/rna_velocity/schema_rna_velocity_demo1.ipynb
examples/sci-car/cmdlines.sh
examples/sci-car/scicar-process2.py
examples/slide-seq/cmdlines.sh
examples/slide-seq/slideseq-process1.py
examples/tcr-binding/cmdlines.sh
examples/tcr-binding/tcrbinding-process1.py
schema/__init__.py
schema/schema_base_config.py
schema/schema_qp.py
schema/utils.py
schema/datasets/__init__.py
schema/datasets/_datasets.py
schema_learn.egg-info/PKG-INFO
schema_learn.egg-info/SOURCES.txt
schema_learn.egg-info/dependency_links.txt
schema_learn.egg-info/not-zip-safe
schema_learn.egg-info/requires.txt
schema_learn.egg-info/top_level.txt