Metadata-Version: 2.1
Name: looper
Version: 1.3.1
Summary: A pipeline submission engine that parses sample inputs and submits pipelines for each sample.
Home-page: https://github.com/pepkit/looper
Author: Nathan Sheffield, Vince Reuter, Michal Stolarczyk, Johanna Klughammer, Andre Rendeiro
License: BSD2
Keywords: bioinformatics,sequencing,ngs
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: License :: OSI Approved :: BSD License
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Description-Content-Type: text/markdown
Requires-Dist: attmap (>=0.12.7)
Requires-Dist: colorama (>=0.3.9)
Requires-Dist: logmuse (>=0.2.0)
Requires-Dist: pandas (>=0.20.2)
Requires-Dist: pyyaml (>=3.12)
Requires-Dist: divvy (>=0.5.0)
Requires-Dist: peppy (>=0.31.0)
Requires-Dist: ubiquerg (>=0.5.2)
Requires-Dist: jinja2
Requires-Dist: eido (>=0.1.3)

# <img src="docs/img/looper_logo.svg" alt="looper logo" height="70">

![Run pytests](https://github.com/pepkit/looper/workflows/Run%20pytests/badge.svg)
[![PEP compatible](http://pepkit.github.io/img/PEP-compatible-green.svg)](http://pepkit.github.io)

`Looper` is a pipeline submission engine. The typical use case is to run a bioinformatics pipeline across many different input samples. Instructions are in the [documentation](http://looper.databio.org/).


