mBin Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) License:
===========================
Copyright (c) 2017, John Beaulaurier
All rights reserved.

For commercial use please contact Mount Sinai Innovation Partners at MSIPInfo@mssm.edu

By exercising the Licensed Rights (defined below), You accept and agree to be bound by 
the terms and conditions of this Creative Commons Attribution-NonCommercial-ShareAlike 
4.0 International Public License ("Public License"). To the extent this Public License 
may be interpreted as a contract, You are granted the Licensed Rights in consideration 
of Your acceptance of these terms and conditions, and the Licensor grants You such 
rights in consideration of benefits the Licensor receives from making the Licensed 
Material available under these terms and conditions.

Section 1 – Definitions.

  a. Adapted Material means material subject to Copyright and Similar Rights that is 
  derived from or based upon the Licensed Material and in which the Licensed Material 
  is translated, altered, arranged, transformed, or otherwise modified in a manner 
  requiring permission under the Copyright and Similar Rights held by the Licensor. 
  For purposes of this Public License, where the Licensed Material is a musical work, 
  performance, or sound recording, Adapted Material is always produced where the 
  Licensed Material is synched in timed relation with a moving image.

  b. Adapter's License means the license You apply to Your Copyright and Similar 
  Rights in Your contributions to Adapted Material in accordance with the terms and 
  conditions of this Public License.

  c. BY-NC-SA Compatible License means a license listed at 
  creativecommons.org/compatiblelicenses, approved by Creative Commons as essentially 
  the equivalent of this Public License.

  d. Copyright and Similar Rights means copyright and/or similar rights closely 
  related to copyright including, without limitation, performance, broadcast, sound 
  recording, and Sui Generis Database Rights, without regard to how the rights are 
  labeled or categorized. For purposes of this Public License, the rights specified in 
  Section 2(b)(1)-(2) are not Copyright and Similar Rights.

  e. Effective Technological Measures means those measures that, in the absence of 
  proper authority, may not be circumvented under laws fulfilling obligations under 
  Article 11 of the WIPO Copyright Treaty adopted on December 20, 1996, and/or 
  similar 
  international agreements.

  f. Exceptions and Limitations means fair use, fair dealing, and/or any other 
  exception or limitation to Copyright and Similar Rights that applies to Your use of 
  the Licensed Material.

  g. License Elements means the license attributes listed in the name of a Creative 
  Commons Public License. The License Elements of this Public License are Attribution, 
  NonCommercial, and ShareAlike.

  h. Licensed Material means the artistic or literary work, database, or other 
  material to which the Licensor applied this Public License.

  i. Licensed Rights means the rights granted to You subject to the terms and 
  conditions of this Public License, which are limited to all Copyright and Similar 
  Rights that apply to Your use of the Licensed Material and that the Licensor has 
  authority to license.

  j. Licensor means the individual(s) or entity(ies) granting rights under this Public 
  License.

  k. NonCommercial means not primarily intended for or directed towards commercial 
  advantage or monetary compensation. For purposes of this Public License, the 
  exchange of the Licensed Material for other material subject to Copyright and 
  Similar Rights by digital file-sharing or similar means is NonCommercial provided 
  there is no payment of monetary compensation in connection with the exchange.

  l. Share means to provide material to the public by any means or process that 
  requires permission under the Licensed Rights, such as reproduction, public display, 
  public performance, distribution, dissemination, communication, or importation, and 
  to make material available to the public including in ways that members of the 
  public may access the material from a place and at a time individually chosen by 
  them.

  m. Sui Generis Database Rights means rights other than copyright resulting from 
  Directive 96/9/EC of the European Parliament and of the Council of 11 March 1996 on 
  the legal protection of databases, as amended and/or succeeded, as well as other 
  essentially equivalent rights anywhere in the world.

  n. You means the individual or entity exercising the Licensed Rights under this 
  Public License. Your has a corresponding meaning.

Section 2 – Scope.

  a. License grant.
    
    1. Subject to the terms and conditions of this Public License, the Licensor hereby 
    grants You a worldwide, royalty-free, non-sublicensable, non-exclusive, 
    irrevocable license to exercise the Licensed Rights in the Licensed Material to:
   
      A. reproduce and Share the Licensed Material, in whole or in part, for 
      NonCommercial purposes only; and
   
      B. produce, reproduce, and Share Adapted Material for NonCommercial purposes 
      only.

    2. Exceptions and Limitations. For the avoidance of doubt, where Exceptions and 
    Limitations apply to Your use, this Public License does not apply, and You do not 
    need to comply with its terms and conditions.
    
    3. Term. The term of this Public License is specified in Section 6(a).
    
    4. Media and formats; technical modifications allowed. The Licensor authorizes You 
    to exercise the Licensed Rights in all media and formats whether now known or 
    hereafter created, and to make technical modifications necessary to do so. The 
    Licensor waives and/or agrees not to assert any right or authority to forbid You 
    from making technical modifications necessary to exercise the Licensed Rights, 
    including technical modifications necessary to circumvent Effective Technological 
    Measures. For purposes of this Public License, simply making modifications 
    authorized by this Section 2(a)(4) never produces Adapted Material.
    
    5. Downstream recipients.
      
      A. Offer from the Licensor – Licensed Material. Every recipient of the Licensed 
      Material automatically receives an offer from the Licensor to exercise the 
      Licensed Rights under the terms and conditions of this Public License.
      
      B. Additional offer from the Licensor – Adapted Material. Every recipient of 
      Adapted Material from You automatically receives an offer from the Licensor to 
      exercise the Licensed Rights in the Adapted Material under the conditions of the 
      Adapter’s License You apply.
      
      C. No downstream restrictions. You may not offer or impose any additional or 
      different terms or conditions on, or apply any Effective Technological Measures 
      to, the Licensed Material if doing so restricts exercise of the Licensed Rights 
      by any recipient of the Licensed Material.

    6. No endorsement. Nothing in this Public License constitutes or may be construed 
    as permission to assert or imply that You are, or that Your use of the Licensed 
    Material is, connected with, or sponsored, endorsed, or granted official status 
    by, the Licensor or others designated to receive attribution as provided in 
    Section 3(a)(1)(A)(i).

  b. Other rights.

    1. Moral rights, such as the right of integrity, are not licensed under this 
    Public License, nor are publicity, privacy, and/or other similar personality 
    rights; however, to the extent possible, the Licensor waives and/or agrees not to 
    assert any such rights held by the Licensor to the limited extent necessary to 
    allow You to exercise the Licensed Rights, but not otherwise.

    2. Patent and trademark rights are not licensed under this Public License.

    3. To the extent possible, the Licensor waives any right to collect royalties from 
    You for the exercise of the Licensed Rights, whether directly or through a 
    collecting society under any voluntary or waivable statutory or compulsory 
    licensing scheme. In all other cases the Licensor expressly reserves any right to 
    collect such royalties, including when the Licensed Material is used other than 
    for NonCommercial purposes.

Section 3 – License Conditions.

Your exercise of the Licensed Rights is expressly made subject to the following 
conditions.

  a. Attribution.

    1. If You Share the Licensed Material (including in modified form), You must:

      A. retain the following if it is supplied by the Licensor with the Licensed 
      Material:
        
        i. identification of the creator(s) of the Licensed Material and any others 
        designated to receive attribution, in any reasonable manner requested by the 
        Licensor (including by pseudonym if designated);
        
        ii. a copyright notice;

        iii. a notice that refers to this Public License;

        iv. a notice that refers to the disclaimer of warranties;

        v. a URI or hyperlink to the Licensed Material to the extent reasonably 
        practicable;

      B. indicate if You modified the Licensed Material and retain an indication of 
      any previous modifications; and

      C. indicate the Licensed Material is licensed under this Public License, and 
      include the text of, or the URI or hyperlink to, this Public License.

    2. You may satisfy the conditions in Section 3(a)(1) in any reasonable manner 
    based on the medium, means, and context in which You Share the Licensed Material. 
    For example, it may be reasonable to satisfy the conditions by providing a URI or 
    hyperlink to a resource that includes the required information.

    3. If requested by the Licensor, You must remove any of the information required 
    by Section 3(a)(1)(A) to the extent reasonably practicable.

  b. ShareAlike.

    In addition to the conditions in Section 3(a), if You Share Adapted Material You 
    produce, the following conditions also apply.

    1. The Adapter’s License You apply must be a Creative Commons license with the 
    same License Elements, this version or later, or a BY-NC-SA Compatible License.

    2. You must include the text of, or the URI or hyperlink to, the Adapter's License 
    You apply. You may satisfy this condition in any reasonable manner based on the 
    medium, means, and context in which You Share Adapted Material.
  
    3. You may not offer or impose any additional or different terms or conditions on, 
    or apply any Effective Technological Measures to, Adapted Material that restrict 
    exercise of the rights granted under the Adapter's License You apply.

Section 4 – Sui Generis Database Rights.

Where the Licensed Rights include Sui Generis Database Rights that apply to Your use 
of the Licensed Material:

  a. for the avoidance of doubt, Section 2(a)(1) grants You the right to extract, 
  reuse, reproduce, and Share all or a substantial portion of the contents of the 
  database for NonCommercial purposes only;
  
  b. if You include all or a substantial portion of the database contents in a 
  database in which You have Sui Generis Database Rights, then the database in which 
  You have Sui Generis Database Rights (but not its individual contents) is Adapted 
  Material, including for purposes of Section 3(b); and

  c. You must comply with the conditions in Section 3(a) if You Share all or a 
  substantial portion of the contents of the database.

For the avoidance of doubt, this Section 4 supplements and does not replace Your 
obligations under this Public License where the Licensed Rights include other 
Copyright and Similar Rights.

Section 5 – Disclaimer of Warranties and Limitation of Liability.

  a. Unless otherwise separately undertaken by the Licensor, to the extent possible, 
  the Licensor offers the Licensed Material as-is and as-available, and makes no 
  representations or warranties of any kind concerning the Licensed Material, whether 
  express, implied, statutory, or other. This includes, without limitation, warranties 
  of title, merchantability, fitness for a particular purpose, non-infringement, 
  absence of latent or other defects, accuracy, or the presence or absence of errors, 
  whether or not known or discoverable. Where disclaimers of warranties are not 
  allowed in full or in part, this disclaimer may not apply to You.

  b. To the extent possible, in no event will the Licensor be liable to You on any 
  legal theory (including, without limitation, negligence) or otherwise for any 
  direct, special, indirect, incidental, consequential, punitive, exemplary, or other 
  losses, costs, expenses, or damages arising out of this Public License or use of the 
  Licensed Material, even if the Licensor has been advised of the possibility of such 
  losses, costs, expenses, or damages. Where a limitation of liability is not allowed 
  in full or in part, this limitation may not apply to You.

  c. The disclaimer of warranties and limitation of liability provided above shall be 
  interpreted in a manner that, to the extent possible, most closely approximates an 
  absolute disclaimer and waiver of all liability.

Section 6 – Term and Termination.

  a. This Public License applies for the term of the Copyright and Similar Rights 
  licensed here. However, if You fail to comply with this Public License, then Your 
  rights under this Public License terminate automatically.

  b. Where Your right to use the Licensed Material has terminated under Section 6(a), 
  it reinstates:

    1. automatically as of the date the violation is cured, provided it is cured 
    within 30 days of Your discovery of the violation; or

    2. upon express reinstatement by the Licensor.

  For the avoidance of doubt, this Section 6(b) does not affect any right the Licensor 
  may have to seek remedies for Your violations of this Public License.

  c. For the avoidance of doubt, the Licensor may also offer the Licensed Material 
  under separate terms or conditions or stop distributing the Licensed Material at any 
  time; however, doing so will not terminate this Public License.

  d Sections 1, 5, 6, 7, and 8 survive termination of this Public License.

Section 7 – Other Terms and Conditions.

  a. The Licensor shall not be bound by any additional or different terms or 
  conditions communicated by You unless expressly agreed.

  b. Any arrangements, understandings, or agreements regarding the Licensed Material 
  not stated herein are separate from and independent of the terms and conditions of 
  this Public License.

Section 8 – Interpretation.

  a. For the avoidance of doubt, this Public License does not, and shall not be 
  interpreted to, reduce, limit, restrict, or impose conditions on any use of the 
  Licensed Material that could lawfully be made without permission under this Public 
  License.

  b. To the extent possible, if any provision of this Public License is deemed 
  unenforceable, it shall be automatically reformed to the minimum extent necessary to 
  make it enforceable. If the provision cannot be reformed, it shall be severed from 
  this Public License without affecting the enforceability of the remaining terms and 
  conditions.

  c. No term or condition of this Public License will be waived and no failure to 
  comply consented to unless expressly agreed to by the Licensor.

  d. Nothing in this Public License constitutes or may be interpreted as a limitation 
  upon, or waiver of, any privileges and immunities that apply to the Licensor or You, 
  including from the legal processes of any jurisdiction or authority.



PacBio "BSD clear" license:
===========================

Copyright (c) 2011-2015, Pacific Biosciences of California, Inc.

All rights reserved.

Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are
met:

* Redistributions of source code must retain the above copyright
  notice, this list of conditions and the following disclaimer.

* Redistributions in binary form must reproduce the above copyright
  notice, this list of conditions and the following disclaimer in the
  documentation and/or other materials provided with the distribution.

* Neither the name of Pacific Biosciences nor the names of its
  contributors may be used to endorse or promote products derived from
  this software without specific prior written permission.

NO EXPRESS OR IMPLIED LICENSES TO ANY PARTY'S PATENT RIGHTS ARE
GRANTED BY THIS LICENSE.  THIS SOFTWARE IS PROVIDED BY PACIFIC
BIOSCIENCES AND ITS CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED
WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL PACIFIC BIOSCIENCES OR ITS CONTRIBUTORS
BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR
BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN
IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.



BioPython license:
=================================================

                 Biopython License Agreement

Permission to use, copy, modify, and distribute this software and its
documentation with or without modifications and for any purpose and
without fee is hereby granted, provided that any copyright notices
appear in all copies and that both those copyright notices and this
permission notice appear in supporting documentation, and that the
names of the contributors or copyright holders not be used in
advertising or publicity pertaining to distribution of the software
without specific prior permission.

THE CONTRIBUTORS AND COPYRIGHT HOLDERS OF THIS SOFTWARE DISCLAIM ALL
WARRANTIES WITH REGARD TO THIS SOFTWARE, INCLUDING ALL IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS, IN NO EVENT SHALL THE
CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY SPECIAL, INDIRECT
OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS
OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE
OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE
OR PERFORMANCE OF THIS SOFTWARE.



NumPy "BSD clear" license: 
=====================================================================
Copyright (c) 2005-2017, NumPy Developers.
All rights reserved.

Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are
met:

    * Redistributions of source code must retain the above copyright
       notice, this list of conditions and the following disclaimer.

    * Redistributions in binary form must reproduce the above
       copyright notice, this list of conditions and the following
       disclaimer in the documentation and/or other materials provided
       with the distribution.

    * Neither the name of the NumPy Developers nor the names of any
       contributors may be used to endorse or promote products derived
       from this software without specific prior written permission.

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.



h5py "BSD clear" license:
=====================================================================
Copyright (c) 2008-2013 Andrew Collette and contributors
http://www.h5py.org
All rights reserved.

Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are
met:

a. Redistributions of source code must retain the above copyright
   notice, this list of conditions and the following disclaimer.

b. Redistributions in binary form must reproduce the above copyright
   notice, this list of conditions and the following disclaimer in the
   documentation and/or other materials provided with the
   distribution.

c. Neither the name of the author nor the names of contributors may 
   be used to endorse or promote products derived from this software 
   without specific prior written permission.

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.



bh-tsne license:
=====================================================================
  Copyright (c) 2014, Laurens van der Maaten (Delft University of Technology)
  All rights reserved.
 
  Redistribution and use in source and binary forms, with or without
  modification, are permitted provided that the following conditions are met:
  1. Redistributions of source code must retain the above copyright
     notice, this list of conditions and the following disclaimer.
  2. Redistributions in binary form must reproduce the above copyright
     notice, this list of conditions and the following disclaimer in the
     documentation and/or other materials provided with the distribution.
  3. All advertising materials mentioning features or use of this software
     must display the following acknowledgement:
     This product includes software developed by the Delft University of Technology.
  4. Neither the name of the Delft University of Technology nor the names of 
     its contributors may be used to endorse or promote products derived from 
     this software without specific prior written permission.
 
  THIS SOFTWARE IS PROVIDED BY LAURENS VAN DER MAATEN ''AS IS'' AND ANY EXPRESS
  OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES 
  OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO 
  EVENT SHALL LAURENS VAN DER MAATEN BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, 
  SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, 
  PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR 
  BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
  CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN 
  ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF 
  SUCH DAMAGE.