LICENSE
MANIFEST.in
README.md
setup.py
modisco/__init__.py
modisco/aggregator.py
modisco/coordproducers.py
modisco/core.py
modisco/gammamix.py
modisco/metaclusterers.py
modisco/nearest_neighbors.py
modisco/util.py
modisco/value_provider.py
modisco.egg-info/PKG-INFO
modisco.egg-info/SOURCES.txt
modisco.egg-info/dependency_links.txt
modisco.egg-info/not-zip-safe
modisco.egg-info/requires.txt
modisco.egg-info/top_level.txt
modisco/affinitymat/__init__.py
modisco/affinitymat/core.py
modisco/affinitymat/transformers.py
modisco/backend/__init__.py
modisco/backend/tensorflow_backend.py
modisco/backend/theano_backend.py
modisco/cluster/__init__.py
modisco/cluster/core.py
modisco/cluster/phenograph/__init__.py
modisco/cluster/phenograph/bruteforce_nn.py
modisco/cluster/phenograph/cluster.py
modisco/cluster/phenograph/core.py
modisco/cluster/phenograph/louvain/linux-community
modisco/cluster/phenograph/louvain/linux-convert
modisco/cluster/phenograph/louvain/linux-hierarchy
modisco/cluster/phenograph/louvain/osx-community
modisco/cluster/phenograph/louvain/osx-convert
modisco/cluster/phenograph/louvain/osx-hierarchy
modisco/clusterinit/__init__.py
modisco/clusterinit/memeinit.py
modisco/hit_scoring/__init__.py
modisco/hit_scoring/fast_hit_scoring.py
modisco/tfmodisco_workflow/__init__.py
modisco/tfmodisco_workflow/seqlets_to_patterns.py
modisco/tfmodisco_workflow/workflow.py
modisco/visualization/__init__.py
modisco/visualization/matplotlibhelpers.py
modisco/visualization/tsne.py
modisco/visualization/viz_sequence.py
test/test_affinitymat.py
test/test_cluster.py
test/test_coordproducers.py
test/test_core.py
test/test_tfmodisco_workflow.py