README.md
pyproject.toml
requirements.txt
setup.py
sc_robust/__init__.py
sc_robust/_version.py
sc_robust/example.py
sc_robust/find_consensus.py
sc_robust/gene_modules.py
sc_robust/normalization.py
sc_robust/process_de_test_split.py
sc_robust/qc.py
sc_robust/sc_robust.py
sc_robust/utils.py
sc_robust.egg-info/PKG-INFO
sc_robust.egg-info/SOURCES.txt
sc_robust.egg-info/dependency_links.txt
sc_robust.egg-info/requires.txt
sc_robust.egg-info/top_level.txt
sc_robust/data/__init__.py
sc_robust/data/ensg_annotations_abbreviated.txt
sc_robust/data/pathways/__init__.py
sc_robust/data/pathways/c1.all.v2025.1.Hs.symbols.gmt
sc_robust/data/pathways/c2.all.v2025.1.Hs.symbols.gmt
sc_robust/data/pathways/c3.all.v2025.1.Hs.symbols.gmt
sc_robust/data/pathways/c4.all.v2025.1.Hs.symbols.gmt
sc_robust/data/pathways/c5.all.v2025.1.Hs.symbols.gmt
sc_robust/data/pathways/c6.all.v2025.1.Hs.symbols.gmt
sc_robust/data/pathways/c7.all.v2025.1.Hs.symbols.gmt
sc_robust/data/pathways/c8.all.v2025.1.Hs.symbols.gmt
sc_robust/data/pathways/ccc.st_custom_cell_cycle.gmt
sc_robust/data/pathways/ccw.st_custom_cell_cycle.gmt
sc_robust/data/pathways/h.all.v2023.2.Hs.symbols.gmt
sc_robust/data/pathways/h.all.v2025.1.Hs.symbols.gmt
sc_robust/de/__init__.py
sc_robust/de/base.py
sc_robust/de/differential_expression.py
sc_robust/de/pathways.py
sc_robust/de/plots.py
sc_robust/de/pseudobulk.py
sc_robust/de/workflow.py
tests/test_anticor_integration.py
tests/test_axis_conventions.py
tests/test_dependencies.py
tests/test_gene_modules.py
tests/test_graph.py
tests/test_pathways.py
tests/test_robust_pipeline.py