# AUTOGENERATED BY NBDEV! DO NOT EDIT!

__all__ = ["index", "modules", "custom_doc_links", "git_url"]

index = {"read_bgen": "00_Genodata.ipynb",
         "read_bim": "00_Genodata.ipynb",
         "bgen2dask": "00_Genodata.ipynb",
         "pybgen_region": "00_Genodata.ipynb",
         "extract_bed": "00_Genodata.ipynb",
         "Genodata": "00_Genodata.ipynb",
         "write_plink": "00_Genodata.ipynb",
         "write_fam": "00_Genodata.ipynb",
         "write_bim": "00_Genodata.ipynb",
         "write_bed": "00_Genodata.ipynb",
         "p2z": "01_Sumstat.ipynb",
         "Sumstat": "01_Sumstat.ipynb",
         "Liftover": "02_Liftover.ipynb",
         "geno_corr": "03_LDmatrix.ipynb",
         "dask_corr": "03_LDmatrix.ipynb",
         "dict2mat": "03_LDmatrix.ipynb",
         "dask_corr_pair": "03_LDmatrix.ipynb",
         "dict2mat_pair": "03_LDmatrix.ipynb",
         "shorten_id": "04_Utils.ipynb",
         "match_ss_with_bim": "06_SNPmatch.ipynb",
         "check_ss": "06_SNPmatch.ipynb",
         "compare_snps": "06_SNPmatch.ipynb",
         "snp_match": "06_SNPmatch.ipynb",
         "check_ss1": "06_SNPmatch.ipynb",
         "pair_match": "06_SNPmatch.ipynb",
         "strand_flip": "06_SNPmatch.ipynb",
         "namebyordabc": "06_SNPmatch.ipynb"}

modules = ["genodata.py",
           "sumstat.py",
           "liftover.py",
           "ldmatrix.py",
           "utils.py"]

doc_url = "https://changebio.github.io/LDtools/"

git_url = "https://github.com/changebio/LDtools/tree/master/"

def custom_doc_links(name): return None
