Metadata-Version: 2.1
Name: goapfp
Version: 0.0.dev5
Summary: Utility tools to work with the Gene Ontology in Python
Author-email: "Alfonso E. Romero" <alfonsoeromero@gmail.com>, Mateo Torres <torresmateo@gmail.com>
Project-URL: Repository, https://github.com/torresmateo/golib/tree/development
Keywords: Gene Ontology,bioinformatics,protein function prediction
Requires-Python: >=3.8
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: scikit-learn
Requires-Dist: rich

# golib
[![Maintainability](https://api.codeclimate.com/v1/badges/7f998988113c7ae5ff28/maintainability)](https://codeclimate.com/github/alfonsoeromero/golib/maintainability)
[![Test Coverage](https://api.codeclimate.com/v1/badges/7f998988113c7ae5ff28/test_coverage)](https://codeclimate.com/github/alfonsoeromero/golib/test_coverage)

A library to work with the Gene Ontology

## Functionality
In summary:
- Parse a Gene Ontology (see: http://geneontology.org) file and allow queries over it.
- Read Gene Ontology Annotation files in different formats.
- Do up-propagation of an annotation or a seed (i.e. following the true-path rule).
- Certain useful I/O operations
