README.md
setup.py
circmimi/__init__.py
circmimi/ambiguous.py
circmimi/annotation.py
circmimi/bed.py
circmimi/blat.py
circmimi/circ.py
circmimi/circmimi.py
circmimi/miranda.py
circmimi/models.py
circmimi/rbp.py
circmimi/seq.py
circmimi/utils.py
circmimi.egg-info/PKG-INFO
circmimi.egg-info/SOURCES.txt
circmimi.egg-info/dependency_links.txt
circmimi.egg-info/entry_points.txt
circmimi.egg-info/requires.txt
circmimi.egg-info/top_level.txt
circmimi/network/__init__.py
circmimi/network/network.py
circmimi/network/utils.py
circmimi/network/formats/__init__.py
circmimi/network/formats/xgmml.py
circmimi/reference/__init__.py
circmimi/reference/config.py
circmimi/reference/gendb.py
circmimi/reference/genmirdb.py
circmimi/reference/genref.py
circmimi/reference/mirbase.py
circmimi/reference/resource.py
circmimi/reference/species.py
circmimi/reference/utils.py
circmimi/scripts/__init__.py
circmimi/scripts/circmimi_tools.py
circmimi/scripts/mp_blat.py