.drone.yml
.gitignore
.gitmodules
AUTHORS
CHANGES.rst
CONTRIBUTING.rst
LICENSE
MANIFEST.in
README.rst
environment.yml
index.ipynb
postBuild
setup.cfg
setup.py
.ci/get_sundials.sh
.ci/run_ci.sh
.ci/test_py2.sh
.circleci/config.yml
.jupyter/jupyter_notebook_config.py
benchmarks/asv.conf.json
benchmarks/benchmarks/__init__.py
benchmarks/benchmarks/pydy_double_pendulum.py
conda-recipe/meta.yaml
conda-recipe/run_test.sh
examples/.interactive-plotting.ipynb
examples/_bench_native_odesys_multi.ipynb
examples/_by_name_convert_to_autonomous.ipynb
examples/_chem_kinet.py
examples/_const_step_size.ipynb
examples/_convert_to_autonomous_eyring_sinusoidal.ipynb
examples/_extend_by_integration.ipynb
examples/_linear_invariants_as_autonomous.ipynb
examples/_lower_bounds.ipynb
examples/_native_override_chemical_kinetics.ipynb
examples/_native_param_cse.ipynb
examples/_native_standalone.ipynb
examples/_nonlinear_3body_system.ipynb
examples/_params_by_name.ipynb
examples/_radiolysis.ipynb
examples/_robertson.ipynb
examples/_sparse_matrix.ipynb
examples/_spring_error_convergence.ipynb
examples/_spring_nonlinear_invariants.ipynb
examples/_transform_and_invariants.ipynb
examples/chem_kinet_input1.txt
examples/harmonic.png
examples/lnx.png
examples/lorenz.ipynb
examples/pydy_double_pendulum.py
examples/standalone_input1.txt
examples/standalone_input2.txt
examples/transformations.ipynb
examples/van_der_pol.png
examples/van_der_pol.py
examples/van_der_pol_formulations.ipynb
examples/van_der_pol_interpolation.ipynb
examples/tests/test_examples.py
joss-paper/codemeta.json
joss-paper/paper.bib
joss-paper/paper.md
pyodesys/__init__.py
pyodesys/_release.py
pyodesys/analysis.py
pyodesys/convergence.py
pyodesys/core.py
pyodesys/integrators.py
pyodesys/plotting.py
pyodesys/results.py
pyodesys/symbolic.py
pyodesys/util.py
pyodesys.egg-info/PKG-INFO
pyodesys.egg-info/SOURCES.txt
pyodesys.egg-info/dependency_links.txt
pyodesys.egg-info/requires.txt
pyodesys.egg-info/top_level.txt
pyodesys/native/__init__.py
pyodesys/native/_base.py
pyodesys/native/cvode.py
pyodesys/native/gsl.py
pyodesys/native/odeint.py
pyodesys/native/util.py
pyodesys/native/sources/_cvode_wrapper.pyx
pyodesys/native/sources/_gsl_wrapper.pyx
pyodesys/native/sources/_odeint_wrapper.pyx
pyodesys/native/sources/anyode.pxd
pyodesys/native/sources/odesys_anyode.hpp
pyodesys/native/sources/odesys_anyode.pxd
pyodesys/native/sources/odesys_anyode_iterative.hpp
pyodesys/native/sources/odesys_anyode_iterative.pxd
pyodesys/native/sources/odesys_anyode_template.cpp
pyodesys/native/sources/odesys_util.hpp
pyodesys/native/sources/odesys_util.pxd
pyodesys/native/sources/standalone_template.cpp
pyodesys/native/sources/anyode/anyode.hpp
pyodesys/native/sources/anyode/anyode_blas_lapack.hpp
pyodesys/native/sources/anyode/anyode_blasless.hpp
pyodesys/native/sources/anyode/anyode_buffer.hpp
pyodesys/native/sources/anyode/anyode_decomposition.hpp
pyodesys/native/sources/anyode/anyode_decomposition_lapack.hpp
pyodesys/native/sources/anyode/anyode_iterative.hpp
pyodesys/native/sources/anyode/anyode_matrix.hpp
pyodesys/native/sources/anyode/anyode_numpy.hpp
pyodesys/native/sources/anyode/anyode_numpy_types.hpp
pyodesys/native/sources/anyode/anyode_parallel.hpp
pyodesys/native/sources/anyode/anyode_util.hpp
pyodesys/native/tests/__init__.py
pyodesys/native/tests/_test_robertson_native.py
pyodesys/native/tests/_tests.py
pyodesys/native/tests/test_cvode.py
pyodesys/native/tests/test_gsl.py
pyodesys/native/tests/test_odeint.py
pyodesys/tests/__init__.py
pyodesys/tests/_cetsa.py
pyodesys/tests/_robertson.py
pyodesys/tests/bateman.py
pyodesys/tests/decay3-formatulations.ipynb
pyodesys/tests/rober.ipynb
pyodesys/tests/test_core.py
pyodesys/tests/test_plotting.py
pyodesys/tests/test_results.py
pyodesys/tests/test_robertson.py
pyodesys/tests/test_symbolic.py
pyodesys/tests/test_symbolic__test_PartiallySolvedSystem__roots.ipynb
pyodesys/tests/test_util.py
scripts/build_conda_recipe.sh
scripts/check_clean_repo_on_master.sh
scripts/coverage_badge.py
scripts/generate_docs.sh
scripts/grep-for-binary-data.sh
scripts/grep-for-merge-blocking-token.sh
scripts/host-jupyter-using-docker.sh
scripts/post_release.sh
scripts/prepare_deploy.sh
scripts/rasterize.js
scripts/release.sh
scripts/render_index.sh
scripts/render_notebooks.sh
scripts/run_tests.sh
scripts/update-gh-pages.sh
scripts/environment/Dockerfile