.. MacSyLib - python library that provide functions for
    detection of macromolecular systems in protein datasets
    using systems modelling and similarity search.
    Authors: Sophie Abby, Bertrand Néron
    Copyright © 2014-2025 Institut Pasteur (Paris) and CNRS.
    See the COPYRIGHT file for details
    MacsyLib is distributed under the terms of the GNU General Public License (GPLv3).
    See the COPYING file for details.


.. _user_guide:

==========
User Guide
==========

Using MacSyLib
==============
.. toctree::
   :maxdepth: 2

   new
   installation
   quickstart
   input
   outputs


MacSyLib functioning
====================
.. toctree::
   :maxdepth: 2

   model_definition
   functioning


Frequently Asked Questions
==========================
.. toctree::
   :maxdepth: 2

   FAQ
