.gitignore
LICENSE
MANUAL.md
README.md
pyproject.toml
setup.py
.github/workflows/build_publish.yml
.github/workflows/test_build_publish.yml
DVH_figures/Patient-1_1.jpg
DVH_figures/Patient-1_2.jpg
DVH_figures/Patient-1_3.jpg
DVH_figures/Patient-1_4.jpg
DVH_figures/Patient-1_5.jpg
DVH_figures/Patient-1_planning.jpg
DVH_figures/Patient-2_1.jpg
DVH_figures/Patient-2_2.jpg
DVH_figures/Patient-2_3.jpg
DVH_figures/Patient-2_4.jpg
DVH_figures/Patient-2_5.jpg
DVH_figures/Patient-2_planning.jpg
DVH_figures/Patient-3_1.jpg
DVH_figures/Patient-3_2.jpg
DVH_figures/Patient-3_3.jpg
DVH_figures/Patient-3_4.jpg
DVH_figures/Patient-3_5.jpg
DVH_figures/Patient-3_planning.jpg
DVH_figures/Patient-4_1.jpg
DVH_figures/Patient-4_2.jpg
DVH_figures/Patient-4_3.jpg
DVH_figures/Patient-4_4.jpg
DVH_figures/Patient-4_5.jpg
DVH_figures/Patient-4_planning.jpg
DVH_figures/Patient-5_1.jpg
DVH_figures/Patient-5_2.jpg
DVH_figures/Patient-5_3.jpg
DVH_figures/Patient-5_4.jpg
DVH_figures/Patient-5_5.jpg
DVH_figures/Patient-5_planning.jpg
DVH_figures/Patient-6_1.jpg
DVH_figures/Patient-6_2.jpg
DVH_figures/Patient-6_3.jpg
DVH_figures/Patient-6_4.jpg
DVH_figures/Patient-6_5.jpg
DVH_figures/Patient-6_planning.jpg
DVH_figures/Patient_10_1.jpg
DVH_figures/Patient_10_2.jpg
DVH_figures/Patient_10_3.jpg
DVH_figures/Patient_10_4.jpg
DVH_figures/Patient_10_5.jpg
DVH_figures/Patient_10_planning.jpg
DVH_figures/Patient_11_1.jpg
DVH_figures/Patient_11_2.jpg
DVH_figures/Patient_11_3.jpg
DVH_figures/Patient_11_4.jpg
DVH_figures/Patient_11_5.jpg
DVH_figures/Patient_11_planning.jpg
DVH_figures/Patient_12_1.jpg
DVH_figures/Patient_12_2.jpg
DVH_figures/Patient_12_3.jpg
DVH_figures/Patient_12_4.jpg
DVH_figures/Patient_12_5.jpg
DVH_figures/Patient_12_planning.jpg
DVH_figures/Patient_13_1.jpg
DVH_figures/Patient_13_2.jpg
DVH_figures/Patient_13_3.jpg
DVH_figures/Patient_13_4.jpg
DVH_figures/Patient_13_5.jpg
DVH_figures/Patient_13_planning.jpg
DVH_figures/Patient_14_1.jpg
DVH_figures/Patient_14_2.jpg
DVH_figures/Patient_14_3.jpg
DVH_figures/Patient_14_4.jpg
DVH_figures/Patient_14_5.jpg
DVH_figures/Patient_14_planning.jpg
DVH_figures/Patient_15_1.jpg
DVH_figures/Patient_15_2.jpg
DVH_figures/Patient_15_3.jpg
DVH_figures/Patient_15_4.jpg
DVH_figures/Patient_15_5.jpg
DVH_figures/Patient_15_planning.jpg
DVH_figures/Patient_16_1.jpg
DVH_figures/Patient_16_2.jpg
DVH_figures/Patient_16_3.jpg
DVH_figures/Patient_16_4.jpg
DVH_figures/Patient_16_5.jpg
DVH_figures/Patient_16_planning.jpg
DVH_figures/Patient_7_1.jpg
DVH_figures/Patient_7_2.jpg
DVH_figures/Patient_7_3.jpg
DVH_figures/Patient_7_4.jpg
DVH_figures/Patient_7_5.jpg
DVH_figures/Patient_7_planning.jpg
DVH_figures/Patient_8_1.jpg
DVH_figures/Patient_8_2.jpg
DVH_figures/Patient_8_3.jpg
DVH_figures/Patient_8_4.jpg
DVH_figures/Patient_8_5.jpg
DVH_figures/Patient_8_planning.jpg
DVH_figures/Patient_9_1.jpg
DVH_figures/Patient_9_2.jpg
DVH_figures/Patient_9_3.jpg
DVH_figures/Patient_9_4.jpg
DVH_figures/Patient_9_5.jpg
DVH_figures/Patient_9_planning.jpg
GUI/2D_GUI.py
GUI/3D_GUI.py
GUI/__init__.py
GUI/gamma_distribution_preview.py
GUI/helpers.py
GUI/interpol2D_OAR.py
GUI/interpol2D_OARminfrac.py
GUI/interpol2D_tumor.py
GUI/interpol3D.py
Patientdata_paper/Patient_11_1.csv
Patientdata_paper/Patient_11_2.csv
Patientdata_paper/Patient_11_3.csv
Patientdata_paper/Patient_11_4.csv
Patientdata_paper/Patient_11_5.csv
Patientdata_paper/Patient_11_planning.csv
Patientdata_paper/Patient_12_1.csv
Patientdata_paper/Patient_12_2.csv
Patientdata_paper/Patient_12_3.csv
Patientdata_paper/Patient_12_4.csv
Patientdata_paper/Patient_12_5.csv
Patientdata_paper/Patient_12_planning.csv
Patientdata_paper/Patient_13_1.csv
Patientdata_paper/Patient_13_2.csv
Patientdata_paper/Patient_13_3.csv
Patientdata_paper/Patient_13_4.csv
Patientdata_paper/Patient_13_5.csv
Patientdata_paper/Patient_13_planning.csv
Patientdata_paper/Patient_14_1.csv
Patientdata_paper/Patient_14_2.csv
Patientdata_paper/Patient_14_3.csv
Patientdata_paper/Patient_14_4.csv
Patientdata_paper/Patient_14_5.csv
Patientdata_paper/Patient_14_planning.csv
Patientdata_paper/Patient_15_1.csv
Patientdata_paper/Patient_15_2.csv
Patientdata_paper/Patient_15_3.csv
Patientdata_paper/Patient_15_4.csv
Patientdata_paper/Patient_15_5.csv
Patientdata_paper/Patient_15_planning.csv
Patientdata_paper/Patient_16_1.csv
Patientdata_paper/Patient_16_2.csv
Patientdata_paper/Patient_16_3.csv
Patientdata_paper/Patient_16_4.csv
Patientdata_paper/Patient_16_5.csv
Patientdata_paper/Patient_16_planning.csv
Patientdata_paper/Patient_1_1.csv
Patientdata_paper/Patient_1_2.csv
Patientdata_paper/Patient_1_3.csv
Patientdata_paper/Patient_1_4.csv
Patientdata_paper/Patient_1_5.csv
Patientdata_paper/Patient_1_planning.csv
Patientdata_paper/Patient_2_1.csv
Patientdata_paper/Patient_2_2.csv
Patientdata_paper/Patient_2_3.csv
Patientdata_paper/Patient_2_4.csv
Patientdata_paper/Patient_2_5.csv
Patientdata_paper/Patient_2_planning.csv
Patientdata_paper/Patient_3_1.csv
Patientdata_paper/Patient_3_2.csv
Patientdata_paper/Patient_3_3.csv
Patientdata_paper/Patient_3_4.csv
Patientdata_paper/Patient_3_5.csv
Patientdata_paper/Patient_3_planning.csv
Patientdata_paper/Patient_4_1.csv
Patientdata_paper/Patient_4_2.csv
Patientdata_paper/Patient_4_3.csv
Patientdata_paper/Patient_4_4.csv
Patientdata_paper/Patient_4_5.csv
Patientdata_paper/Patient_4_planning.csv
Patientdata_paper/Patient_5_.csv
Patientdata_paper/Patient_5_1.csv
Patientdata_paper/Patient_5_2.csv
Patientdata_paper/Patient_5_3.csv
Patientdata_paper/Patient_5_4.csv
Patientdata_paper/Patient_5_5.csv
Patientdata_paper/Patient_6_1.csv
Patientdata_paper/Patient_6_2.csv
Patientdata_paper/Patient_6_3.csv
Patientdata_paper/Patient_6_4.csv
Patientdata_paper/Patient_6_5.csv
Patientdata_paper/Patient_6_planning.csv
Patientdata_paper/Patient_7_1.csv
Patientdata_paper/Patient_7_2.csv
Patientdata_paper/Patient_7_3.csv
Patientdata_paper/Patient_7_4.csv
Patientdata_paper/Patient_7_5.csv
Patientdata_paper/Patient_7_planning.csv
Patientdata_paper/Patient_8_1.csv
Patientdata_paper/Patient_8_2.csv
Patientdata_paper/Patient_8_3.csv
Patientdata_paper/Patient_8_4.csv
Patientdata_paper/Patient_8_5.csv
Patientdata_paper/Patient_8_planning.csv
Patientdata_paper/Patient_9_1.csv
Patientdata_paper/Patient_9_2.csv
Patientdata_paper/Patient_9_3.csv
Patientdata_paper/Patient_9_4.csv
Patientdata_paper/Patient_9_5.csv
Patientdata_paper/Patient_9_planning.csv
Patientdata_paper/patient_10_1.csv
Patientdata_paper/patient_10_2.csv
Patientdata_paper/patient_10_3.csv
Patientdata_paper/patient_10_4.csv
Patientdata_paper/patient_10_5.csv
Patientdata_paper/patient_10_planning.csv
src/adaptfx/__init__.py
src/adaptfx/_version.py
src/adaptfx/aft.py
src/adaptfx/aft_prompt.py
src/adaptfx/aft_utils.py
src/adaptfx/constants.py
src/adaptfx/maths.py
src/adaptfx/planning.py
src/adaptfx/radiobiology.py
src/adaptfx/reinforce.py
src/adaptfx/reinforce_old.py
src/adaptfx/visualiser.py
src/adaptfx.egg-info/PKG-INFO
src/adaptfx.egg-info/SOURCES.txt
src/adaptfx.egg-info/dependency_links.txt
src/adaptfx.egg-info/entry_points.txt
src/adaptfx.egg-info/requires.txt
src/adaptfx.egg-info/top_level.txt
work/frac_example.json
work/oar_example.json
work/testing.json