from .hisat3n_general import \
    separate_unique_and_multi_align_reads, \
    convert_hisat_bam_strandness, \
    make_snakefile_hisat3n
from .utilities import validate_cwd_fastq_paths, read_mapping_config
from .hisat3n_mct import select_mct_reads_normal, aggregate_feature_counts
from .summary import snmc_summary, snmct_summary
