LICENSE
README.md
setup.py
openfold/__init__.py
openfold/config.py
openfold.egg-info/PKG-INFO
openfold.egg-info/SOURCES.txt
openfold.egg-info/dependency_links.txt
openfold.egg-info/top_level.txt
openfold/data/__init__.py
openfold/data/data_modules.py
openfold/data/data_pipeline.py
openfold/data/data_transforms.py
openfold/data/errors.py
openfold/data/feature_pipeline.py
openfold/data/input_pipeline.py
openfold/data/mmcif_parsing.py
openfold/data/parsers.py
openfold/data/templates.py
openfold/data/tools/__init__.py
openfold/data/tools/hhblits.py
openfold/data/tools/hhsearch.py
openfold/data/tools/jackhmmer.py
openfold/data/tools/kalign.py
openfold/data/tools/utils.py
openfold/model/__init__.py
openfold/model/dropout.py
openfold/model/embedders.py
openfold/model/evoformer.py
openfold/model/heads.py
openfold/model/model.py
openfold/model/msa.py
openfold/model/outer_product_mean.py
openfold/model/pair_transition.py
openfold/model/primitives.py
openfold/model/structure_module.py
openfold/model/template.py
openfold/model/torchscript.py
openfold/model/triangular_attention.py
openfold/model/triangular_multiplicative_update.py
openfold/np/__init__.py
openfold/np/protein.py
openfold/np/residue_constants.py
openfold/np/relax/__init__.py
openfold/np/relax/amber_minimize.py
openfold/np/relax/cleanup.py
openfold/np/relax/relax.py
openfold/np/relax/utils.py
openfold/resources/__init__.py
openfold/utils/__init__.py
openfold/utils/argparse.py
openfold/utils/callbacks.py
openfold/utils/checkpointing.py
openfold/utils/chunk_utils.py
openfold/utils/exponential_moving_average.py
openfold/utils/feats.py
openfold/utils/import_weights.py
openfold/utils/logger.py
openfold/utils/loss.py
openfold/utils/lr_schedulers.py
openfold/utils/precision_utils.py
openfold/utils/rigid_utils.py
openfold/utils/script_utils.py
openfold/utils/seed.py
openfold/utils/superimposition.py
openfold/utils/suppress_output.py
openfold/utils/tensor_utils.py
openfold/utils/trace_utils.py
openfold/utils/validation_metrics.py
openfold/utils/kernel/__init__.py
openfold/utils/kernel/attention_core.py
openfold/utils/kernel/csrc/compat.h
openfold/utils/kernel/csrc/softmax_cuda.cpp
openfold/utils/kernel/csrc/softmax_cuda_kernel.cu
openfold/utils/kernel/csrc/softmax_cuda_stub.cpp