Metadata-Version: 2.1
Name: squiggle
Version: 0.1.2
Summary: DNA Sequence Visualization for Humans.
Home-page: https://github.com/Benjamin-Lee/squiggle
Author: Benjamin Lee
Author-email: benjamindlee@me.com
License: MIT
Description: 
        ![Logo](https://github.com/Lab41/squiggle/raw/master/images/logo.png)
        
        [![Build Status](https://travis-ci.org/Lab41/squiggle.svg?branch=master)](https://travis-ci.org/Lab41/squiggle)
        [![Cov](https://codecov.io/gh/Lab41/squiggle/branch/master/graph/badge.svg)](https://codecov.io/gh/Lab41/squiggle)
        [![CodeFactor](https://www.codefactor.io/repository/github/Lab41/squiggle/badge)](https://www.codefactor.io/repository/github/Lab41/squiggle/)
        [![Docs](http://readthedocs.org/projects/freqgen/badge/?version=latest)](http://squiggle.readthedocs.io/en/latest/?badge=latest)
        [![PyPI](https://img.shields.io/pypi/v/squiggle.svg)](https://pypi.org/project/squiggle/)
        
        Squiggle is a two-dimensional DNA sequence visualization library that can turn
        FASTA sequence files like this:
        
            >lcl|NC_000011.10_cds_NP_000509.1_1 [gene=HBB]
            ATGGTGCATCTGACTCCTGAGGAGAAGTCTGCCGTTACTGCCCTGTGGGGCAAGGTGAACGTGGATGAAG
            TTGGTGGTGAGGCCCTGGGCAGGCTGCTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGTCCTTTGG
            GGATCTGTCCACTCCTGATGCTGTTATGGGCAACCCTAAGGTGAAGGCTCATGGCAAGAAAGTGCTCGGT
            GCCTTTAGTGATGGCCTGGCTCACCTGGACAACCTCAAGGGCACCTTTGCCACACTGAGTGAGCTGCACT
            GTGACAAGCTGCACGTGGATCCTGAGAACTTCAGGCTCCTGGGCAACGTGCTGGTCTGTGTGCTGGCCCA
            TCACTTTGGCAAAGAATTCACCCCACCAGTGCAGGCTGCCTATCAGAAAGTGGTGGCTGGTGTGGCTAAT
            GCCCTGGCCCACAAGTATCACTAA
        
        into gorgeous, interactive visualizations like this:
        
        <p align ="center">
            <img src="https://github.com/Lab41/squiggle/raw/master/images/human_HBB_squiggle.png" alt="Human Squiggle" width="750px"/>
        </p>
        
        ## Installation
        
        If you don't have Python 3.4 or greater installed, be sure to [get it
        ](https://www.python.org/downloads/). To get the current stable version of
        Squiggle, run:
        
            $ pip install squiggle
        
        Or, alternatively, if you want to get the latest development version:
        
            $ pip install git+https://github.com/Lab41/squiggle.git
        
        ## Usage
        
        Using Squiggle is as easy as:
        
            $ squiggle your_sequence.fasta
        
        Squiggle has tons of options available to make beautiful, interactive
        visualizations of DNA sequences. To get a full rundown of the various option,
        take look at the documentation [here](https://squiggle.readthedocs.io).
        
        ## Citation
        
        To be determined!
        
Platform: UNKNOWN
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: Implementation :: CPython
Classifier: Development Status :: 4 - Beta
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Visualization
Classifier: Intended Audience :: Science/Research
Requires-Python: >=3.4.0
Description-Content-Type: text/markdown
