umap-learn>=0.5.0
scvi-tools>=1.3.0
scanpy
anndata
mudata
pandas
numpy
matplotlib
seaborn
torch>=2.0
annoy
scikit-image
scikit-misc
igraph
bbknn
scanorama
harmonypy
pymde
datashader
fa2_modified
pynndescent
gseapy
metacells
sh
networkx
