MANIFEST.in
README.md
setup.cfg
setup.py
lim/__init__.py
lim.egg-info/PKG-INFO
lim.egg-info/SOURCES.txt
lim.egg-info/dependency_links.txt
lim.egg-info/not-zip-safe
lim.egg-info/requires.txt
lim.egg-info/top_level.txt
lim/cov/__init__.py
lim/cov/eye.py
lim/cov/linear.py
lim/cov/sum.py
lim/cov/test/test_eye_cov.py
lim/cov/test/test_linear_cov.py
lim/cov/test/test_sum_cov.py
lim/data/__init__.py
lim/data/column.py
lim/data/data.py
lim/data/index.py
lim/data/table.py
lim/data/util.py
lim/data/vector.py
lim/data/matrix/__init__.py
lim/data/matrix/_array.py
lim/data/matrix/_base.py
lim/data/matrix/_scalar.py
lim/data/matrix/_slice.py
lim/data/matrix/index.py
lim/data/matrix/interface.py
lim/data/matrix/ndarray.py
lim/data/matrix/view.py
lim/data/test/test_column.py
lim/data/test/test_data_util.py
lim/data/test/test_table.py
lim/data/test/test_vector.py
lim/genetics/__init__.py
lim/genetics/info.py
lim/genetics/model.py
lim/genetics/transformation.py
lim/genetics/core/__init__.py
lim/genetics/core/fastlmm.py
lim/genetics/core/slowlmm.py
lim/genetics/core/test/test_genetics_fastlmm.py
lim/genetics/heritability/__init__.py
lim/genetics/heritability/correction.py
lim/genetics/qtl/__init__.py
lim/genetics/qtl/info.py
lim/genetics/qtl/lrt.py
lim/genetics/qtl/scan.py
lim/genetics/qtl/test/test_qtl.py
lim/genetics/variance/__init__.py
lim/genetics/variance/decomposition.py
lim/inference/__init__.py
lim/inference/fastlmm.py
lim/inference/slowlmm.py
lim/inference/binomep/binomep.py
lim/inference/test/test_inference_fastlmm.py
lim/inference/test/test_slowlmm.py
lim/math/__init__.py
lim/math/epsilon.py
lim/math/scalar.py
lim/mean/__init__.py
lim/mean/linear.py
lim/mean/offset.py
lim/mean/test/test_linear_mean.py
lim/mean/test/test_offset.py
lim/random/__init__.py
lim/random/fastlmm.py
lim/random/regression.py
lim/reader/__init__.py
lim/reader/bed.py
lim/reader/csv.py
lim/reader/group.py
lim/reader/h5.py
lim/reader/map.py
lim/reader/old_h5.py
lim/reader/ped.py
lim/reader/vcf.py
lim/reader/cplink/__init__.py
lim/reader/cplink/bed.c
lim/reader/cplink/bed.h
lim/reader/cplink/bed.py
lim/reader/test/test_bed.py
lim/reader/test/test_csv.py
lim/reader/test/test_h5.py
lim/reader/test/test_ped.py
lim/reader/test/data/2d_array.csv
lim/reader/test/data/array.h5
lim/reader/test/data/plink/test.bed
lim/reader/test/data/plink/test.bim
lim/reader/test/data/plink/test.fam
lim/reader/test/data/plink/test.map
lim/reader/test/data/plink/test.ped
lim/test/test_array_readers.py
lim/test/test_data_creation.py
lim/test/data/1d_array_col.csv
lim/test/data/1d_array_col_bytes.csv
lim/test/data/1d_array_row.csv
lim/test/data/1d_array_row_bytes.csv
lim/test/data/2d_array.csv
lim/test/data/2d_array_bytes.csv
lim/test/data/array.h5
lim/test/data/def/expr_cond0.csv
lim/test/data/def/expr_cond1.csv
lim/test/data/def/expr_cond2.csv
lim/test/data/def/expr_cond3.csv
lim/test/data/def/gene_expr.h5
lim/test/data/def/plink.bim
lim/test/data/def/plink.map
lim/test/data/def/plink.ped
lim/test/data/def_old/example.bed
lim/test/data/def_old/example.bim
lim/test/data/def_old/example.fam
lim/test/data/def_old/example.h5
lim/test/data/def_old/example.map
lim/test/data/def_old/example.ped
lim/test/data/def_old/smoke.csv
lim/test/data/plink/test.bed
lim/test/data/plink/test.bim
lim/test/data/plink/test.fam
lim/test/data/plink/test.map
lim/test/data/plink/test.ped
lim/tool/__init__.py
lim/tool/kinship.py
lim/tool/normalize.py
lim/tool/test/test_normalize.py
lim/util/__init__.py
lim/util/block.py
lim/util/fruits.py
lim/util/greek.py
lim/util/quantile_summary.py
lim/util/six.py
lim/util/type.py