.gitignore
LICENSE
README.rst
pyproject.toml
requirements.txt
.github/workflows/build_documentation.yml
doc/.nojekyll
doc/Makefile
doc/api.rst
doc/conf.py
doc/guide.rst
doc/index.rst
doc/license.rst
doc/make.bat
doc/requirements.txt
doc/tutorial.rst
src/_custom_build.py
src/md_harmonize/BASS.pyx
src/md_harmonize/KEGG_database_scraper.py
src/md_harmonize/KEGG_parser.py
src/md_harmonize/MetaCyc_parser.py
src/md_harmonize/__init__.py
src/md_harmonize/__main__.py
src/md_harmonize/aromatics.py
src/md_harmonize/compound.py
src/md_harmonize/harmonization.py
src/md_harmonize/openbabel_utils.py
src/md_harmonize/reaction.py
src/md_harmonize/supplement.py
src/md_harmonize/tools.py
src/md_harmonize/uncythonized_BASS.py
src/md_harmonize.egg-info/PKG-INFO
src/md_harmonize.egg-info/SOURCES.txt
src/md_harmonize.egg-info/dependency_links.txt
src/md_harmonize.egg-info/entry_points.txt
src/md_harmonize.egg-info/requires.txt
src/md_harmonize.egg-info/top_level.txt
src/md_harmonize/supplements/supplementary_data.json