Metadata-Version: 2.1
Name: biotree-tools
Version: 0.0.4
Summary: Collection of bioinformatics tools related to alignments and phylogenetic trees
Home-page: https://github.com/pypa/biotree_tools
Author: Marco Mariotti
Author-email: marco.mariotti@ub.edu
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.6
Description-Content-Type: text/markdown
License-File: LICENSE

# biotree_tools
Collection of bioinformatics tools related to alignments and phylogenetic trees

## Installation

conda install -c mmariotti -c bioconda -c etetoolkit  biotree_tools

## Tools
- **alignment_tools**  utility to manipulate (reformat, subset, trim...) multiple sequence alignments
- **tree_tools**       utility to manipulate (rename, prune, set output...) trees in newick format
- **phylo_context**    given protein sequences, build and draw a tree to identify phylogenetic (sub)families
- **show_tree**        flexible tool to visualize an input protein tree in newick format

Run any tool with option -h to display its usage.
