.gitignore
.gitmodules
.pre-commit-config.yaml
.readthedocs.yml
LICENSE
MANIFEST.in
README.rst
codecov.yml
pyproject.toml
src/moscot/__init__.py
src/moscot/_constants.py
src/moscot/_logging.py
src/moscot/_registry.py
src/moscot/_types.py
src/moscot/datasets.py
src/moscot/py.typed
src/moscot.egg-info/PKG-INFO
src/moscot.egg-info/SOURCES.txt
src/moscot.egg-info/dependency_links.txt
src/moscot.egg-info/requires.txt
src/moscot.egg-info/top_level.txt
src/moscot/backends/__init__.py
src/moscot/backends/utils.py
src/moscot/backends/ott/__init__.py
src/moscot/backends/ott/_utils.py
src/moscot/backends/ott/output.py
src/moscot/backends/ott/solver.py
src/moscot/base/__init__.py
src/moscot/base/cost.py
src/moscot/base/output.py
src/moscot/base/solver.py
src/moscot/base/problems/__init__.py
src/moscot/base/problems/_mixins.py
src/moscot/base/problems/_utils.py
src/moscot/base/problems/birth_death.py
src/moscot/base/problems/compound_problem.py
src/moscot/base/problems/manager.py
src/moscot/base/problems/problem.py
src/moscot/costs/__init__.py
src/moscot/costs/_costs.py
src/moscot/costs/_utils.py
src/moscot/plotting/__init__.py
src/moscot/plotting/_plotting.py
src/moscot/plotting/_utils.py
src/moscot/problems/__init__.py
src/moscot/problems/_utils.py
src/moscot/problems/cross_modality/__init__.py
src/moscot/problems/cross_modality/_mixins.py
src/moscot/problems/cross_modality/_translation.py
src/moscot/problems/generic/__init__.py
src/moscot/problems/generic/_generic.py
src/moscot/problems/generic/_mixins.py
src/moscot/problems/space/__init__.py
src/moscot/problems/space/_alignment.py
src/moscot/problems/space/_mapping.py
src/moscot/problems/space/_mixins.py
src/moscot/problems/spatiotemporal/__init__.py
src/moscot/problems/spatiotemporal/_spatio_temporal.py
src/moscot/problems/time/__init__.py
src/moscot/problems/time/_lineage.py
src/moscot/problems/time/_mixins.py
src/moscot/utils/__init__.py
src/moscot/utils/data.py
src/moscot/utils/subset_policy.py
src/moscot/utils/tagged_array.py
src/moscot/utils/_data/allTFs_dmel.txt
src/moscot/utils/_data/allTFs_hg38.txt
src/moscot/utils/_data/allTFs_mm.txt
src/moscot/utils/_data/human_apoptosis.txt
src/moscot/utils/_data/human_proliferation.txt
src/moscot/utils/_data/mouse_apoptosis.txt
src/moscot/utils/_data/mouse_proliferation.txt