Metadata-Version: 2.1
Name: vfdbQuery
Version: 0.0.5
Summary: Package for quickly querying an assembly against the VFDB
Home-page: https://github.com/bfssi-forest-dussault/vfdbQuery
Author: Forest Dussault
Author-email: forest.dussault@canada.ca
License: UNKNOWN
Description: # vfdbQuery
        
        ### Requirements
        - Python 3.6
        - [ncbi-blast+](https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs&DOC_TYPE=Download) (makeblastdb and blastn must be in your $PATH)
        
        ### Installation
        ```
        pip install vfdbQuery
        ```
        
        ### Usage
        ```
        Usage: vfdbQuery [OPTIONS]
        
          vfdbQuery is a simple script for querying an input genome assembly against
          the Virulence Factor Database (VFDB).
        
        Options:
          -i, --infile PATH     FASTA file that you want to search against VFDB
                                [required]
          -db, --database PATH  Path to Virulence Factor Database (VFDB)  [required]
          --help                Show this message and exit.
        
        ```
Platform: UNKNOWN
Requires-Python: ~=3.6
Description-Content-Type: text/markdown
