README.md
setup.py
PALS_pathway.egg-info/PKG-INFO
PALS_pathway.egg-info/SOURCES.txt
PALS_pathway.egg-info/dependency_links.txt
PALS_pathway.egg-info/top_level.txt
pals/GSEA.py
pals/ORA.py
pals/PALS.py
pals/__init__.py
pals/common.py
pals/evaluation.py
pals/feature_extraction.py
pals/noise.py
pals/pimp_tools.py
pals/reactome.py
pals/run_pathway_analysis.py
pals/data/COMPOUND.json.zip
pals/data/ChEBI.json.zip
pals/data/PiMP_KEGG.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Arabidopsis thaliana.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Bos taurus.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Caenorhabditis elegans.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Canis familiaris.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Danio rerio.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Dictyostelium discoideum.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Drosophila melanogaster.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Gallus gallus.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Homo sapiens.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Mus musculus.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Oryza sativa.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Plasmodium falciparum.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Rattus norvegicus.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Saccharomyces cerevisiae.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Schizosaccharomyces pombe.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Sus scrofa.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Taeniopygia guttata.json.zip
pals/data/reactome/metabolic_pathways/COMPOUND/Xenopus tropicalis.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Arabidopsis thaliana.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Bos taurus.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Caenorhabditis elegans.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Canis familiaris.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Danio rerio.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Dictyostelium discoideum.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Drosophila melanogaster.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Gallus gallus.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Homo sapiens.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Mus musculus.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Oryza sativa.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Plasmodium falciparum.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Rattus norvegicus.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Saccharomyces cerevisiae.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Schizosaccharomyces pombe.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Sus scrofa.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Taeniopygia guttata.json.zip
pals/data/reactome/metabolic_pathways/ChEBI/Xenopus tropicalis.json.zip