LICENSE
MANIFEST.in
README.md
pyproject.toml
requirements.txt
setup.py
.git/FETCH_HEAD
.git/HEAD
.git/config
.git/description
.git/index
scFates/__init__.py
scFates/logging.py
scFates/pl.py
scFates/pp.py
scFates/settings.py
scFates/tl.py
scFates.egg-info/PKG-INFO
scFates.egg-info/SOURCES.txt
scFates.egg-info/dependency_links.txt
scFates.egg-info/not-zip-safe
scFates.egg-info/requires.txt
scFates.egg-info/top_level.txt
scFates/datasets/__init__.py
scFates/datasets/_datasets.py
scFates/get/__init__.py
scFates/get/get.py
scFates/plot/__init__.py
scFates/plot/binned_pseudotime_meta.py
scFates/plot/dendrogram.py
scFates/plot/features.py
scFates/plot/linearity_deviation.py
scFates/plot/matrix.py
scFates/plot/milestones.py
scFates/plot/module_inclusion.py
scFates/plot/modules.py
scFates/plot/palette_tools.py
scFates/plot/palettes.py
scFates/plot/slide_cors.py
scFates/plot/synchro_path.py
scFates/plot/test_association.py
scFates/plot/test_fork.py
scFates/plot/trajectory.py
scFates/plot/utils.py
scFates/preprocessing/__init__.py
scFates/preprocessing/diffusion.py
scFates/preprocessing/pagoda2.py
scFates/tools/__init__.py
scFates/tools/bifurcation_tools.py
scFates/tools/cluster.py
scFates/tools/conversion.py
scFates/tools/correlation_tools.py
scFates/tools/dendrogram.py
scFates/tools/fit.py
scFates/tools/graph_fitting.py
scFates/tools/graph_operations.py
scFates/tools/grapheno_modified.py
scFates/tools/linearity_deviation.py
scFates/tools/pseudotime.py
scFates/tools/root.py
scFates/tools/slide_cors.py
scFates/tools/test_association.py
scFates/tools/utils.py