INSTALL.txt
LICENSE
MANIFEST.in
MANUAL.md
README.md
README.rst
TODO.txt
requirements.txt
setup.cfg
setup.py
CoreTracker.egg-info/PKG-INFO
CoreTracker.egg-info/SOURCES.txt
CoreTracker.egg-info/dependency_links.txt
CoreTracker.egg-info/entry_points.txt
CoreTracker.egg-info/requires.txt
CoreTracker.egg-info/top_level.txt
bin/codonclust
bin/coreconvert
bin/corefus
bin/coretracker
bin/coretracker-prep
bin/coretracker-run
bin/coretrans
bin/corextract
coretracker/__init__.py
coretracker/FisherExact/Fisher.py
coretracker/FisherExact/__init__.py
coretracker/FisherExact/statlib/FEXACT.F90
coretracker/FisherExact/statlib/__init__.py
coretracker/FisherExact/statlib/asa159.f90
coretracker/FisherExact/statlib/asa205.f90
coretracker/FisherExact/statlib/fexact-f2pywrappers2.f90
coretracker/FisherExact/statlib/fexact.pyf
coretracker/FisherExact/statlib/prterr.f
coretracker/classifier/__init__.py
coretracker/classifier/classifier.py
coretracker/classifier/new_classifier.py
coretracker/classifier/model_old/__init__.py
coretracker/classifier/models/__init__.py
coretracker/classifier/models/__init__.pyc
coretracker/classifier/models/1/classifier.pkl.z
coretracker/classifier/models/2/classifier.pkl.z
coretracker/classifier/models/3/classifier.pkl.z
coretracker/coreutils/AncestralRecon.py
coretracker/coreutils/Faces.py
coretracker/coreutils/RNAEditChecker.py
coretracker/coreutils/__init__.py
coretracker/coreutils/corefile.py
coretracker/coreutils/instance.py
coretracker/coreutils/letterconfig.py
coretracker/coreutils/mtgenes.py
coretracker/coreutils/output.py
coretracker/coreutils/pdfutils.py
coretracker/coreutils/template.py
coretracker/coreutils/utils.py
coretracker/coreutils/templates/default.html
coretracker/coreutils/templates/mtcorr.txt
coretracker/coreutils/templates/rea_improve.html
coretracker/coreutils/templates/style.css
coretracker/settings/__init__.py
coretracker/settings/parameters.py
coretracker/settings/settings.py