LICENSE
MANIFEST.in
README.rst
pyproject.toml
setup.cfg
setup.py
versioneer.py
niworkflows/__about__.py
niworkflows/__init__.py
niworkflows/_version.py
niworkflows/testing.py
niworkflows.egg-info/PKG-INFO
niworkflows.egg-info/SOURCES.txt
niworkflows.egg-info/dependency_links.txt
niworkflows.egg-info/entry_points.txt
niworkflows.egg-info/requires.txt
niworkflows.egg-info/top_level.txt
niworkflows.egg-info/zip-safe
niworkflows/anat/__init__.py
niworkflows/anat/ants.py
niworkflows/anat/coregistration.py
niworkflows/anat/freesurfer.py
niworkflows/anat/skullstrip.py
niworkflows/cli/__init__.py
niworkflows/cli/boldref.py
niworkflows/data/__init__.py
niworkflows/data/antsBrainExtractionNoLaplacian_precise.json
niworkflows/data/antsBrainExtractionNoLaplacian_testing.json
niworkflows/data/antsBrainExtraction_precise.json
niworkflows/data/antsBrainExtraction_testing.json
niworkflows/data/boldref-mni_registration_precise_000.json
niworkflows/data/boldref-mni_registration_precise_001.json
niworkflows/data/boldref-mni_registration_precise_002.json
niworkflows/data/boldref-mni_registration_testing_000.json
niworkflows/data/boldref-mni_registration_testing_001.json
niworkflows/data/boldref-mni_registration_testing_002.json
niworkflows/data/epi_atlasbased_brainmask.json
niworkflows/data/itkIdentityTransform.txt
niworkflows/data/nipreps.json
niworkflows/data/sentinel.nii.gz
niworkflows/data/t1w-mni_registration_fast_000.json
niworkflows/data/t1w-mni_registration_precise_000.json
niworkflows/data/t1w-mni_registration_precise_001.json
niworkflows/data/t1w-mni_registration_precise_002.json
niworkflows/data/t1w-mni_registration_testing_000.json
niworkflows/data/t1w-mni_registration_testing_001.json
niworkflows/data/t1w-mni_registration_testing_002.json
niworkflows/dwi/__init__.py
niworkflows/engine/__init__.py
niworkflows/engine/workflows.py
niworkflows/func/__init__.py
niworkflows/func/util.py
niworkflows/interfaces/__init__.py
niworkflows/interfaces/bids.py
niworkflows/interfaces/bold.py
niworkflows/interfaces/cifti.py
niworkflows/interfaces/confounds.py
niworkflows/interfaces/fixes.py
niworkflows/interfaces/freesurfer.py
niworkflows/interfaces/header.py
niworkflows/interfaces/images.py
niworkflows/interfaces/itk.py
niworkflows/interfaces/nibabel.py
niworkflows/interfaces/nilearn.py
niworkflows/interfaces/nitransforms.py
niworkflows/interfaces/norm.py
niworkflows/interfaces/patches.py
niworkflows/interfaces/plotting.py
niworkflows/interfaces/probmaps.py
niworkflows/interfaces/space.py
niworkflows/interfaces/surf.py
niworkflows/interfaces/utility.py
niworkflows/interfaces/reportlets/__init__.py
niworkflows/interfaces/reportlets/base.py
niworkflows/interfaces/reportlets/masks.py
niworkflows/interfaces/reportlets/registration.py
niworkflows/interfaces/reportlets/segmentation.py
niworkflows/reports/__init__.py
niworkflows/reports/core.py
niworkflows/reports/default.yml
niworkflows/reports/report.tpl
niworkflows/utils/__init__.py
niworkflows/utils/bids.py
niworkflows/utils/connections.py
niworkflows/utils/images.py
niworkflows/utils/misc.py
niworkflows/utils/spaces.py
niworkflows/viz/__init__.py
niworkflows/viz/notebook.py
niworkflows/viz/plots.py
niworkflows/viz/utils.py
niworkflows/workflows/__init__.py
niworkflows/workflows/epi/__init__.py
niworkflows/workflows/epi/refmap.py