Metadata-Version: 2.0
Name: GSVA
Version: 1.0.1
Summary: Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Home-page: https://github.com/jason-weirather/GSVA
Author: Jason L Weirather
Author-email: jason.weirather@gmail.com
License: Apache License, Version 2.0
Description-Content-Type: UNKNOWN
Keywords: bioinformatics,R,enrichment,GSVA,ssGSEA,GSEA,bioconductor
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: Apache Software License
Requires-Dist: pandas

# GSVA Python CLI

Python hooks for R's GSVA bioconductor package to make working in Pandas easier, and a handy CLI for execution of GSVA.

Autodoc manual is here:  https://jason-weirather.github.io/GSVA/

#### This is not the offical site for the GSVA bioconductor package

##### Find the official R package here

https://doi.org/doi:10.18129/B9.bioc.GSVA

##### And if you find this useful, please cite the author's publication

Hänzelmann S, Castelo R and Guinney J (2013). “GSVA: gene set variation analysis for microarray and RNA-Seq data.” BMC Bioinformatics, 14, pp. 7. doi: 10.1186/1471-2105-14-7, http://www.biomedcentral.com/1471-2105/14/7.


