LICENSE
MANIFEST.in
README.rst
pyproject.toml
setup.py
ModelSEEDpy.egg-info/PKG-INFO
ModelSEEDpy.egg-info/SOURCES.txt
ModelSEEDpy.egg-info/dependency_links.txt
ModelSEEDpy.egg-info/requires.txt
ModelSEEDpy.egg-info/top_level.txt
modelseedpy/__init__.py
modelseedpy/config.cfg
modelseedpy/helpers.py
modelseedpy/biochem/__init__.py
modelseedpy/biochem/hierarchical_ontology.py
modelseedpy/biochem/modelseed_biochem.py
modelseedpy/biochem/modelseed_builder.py
modelseedpy/biochem/modelseed_compound.py
modelseedpy/biochem/modelseed_reaction.py
modelseedpy/biochem/modelseed_to_cobra.py
modelseedpy/biochem/seed_object.py
modelseedpy/biochem/stoich_integration.py
modelseedpy/biochem/transporters.py
modelseedpy/biochem/utils.py
modelseedpy/community/__init__.py
modelseedpy/community/commkineticpkg.py
modelseedpy/community/dfbapkg.py
modelseedpy/community/mscommunity.py
modelseedpy/community/mscompatibility.py
modelseedpy/core/__init__.py
modelseedpy/core/annotationontology.py
modelseedpy/core/biolog.py
modelseedpy/core/exceptions.py
modelseedpy/core/fbahelper.py
modelseedpy/core/gapfillinghelper.py
modelseedpy/core/msatpcorrection.py
modelseedpy/core/msbuilder.py
modelseedpy/core/mseditorapi.py
modelseedpy/core/msgapfill.py
modelseedpy/core/msgenome.py
modelseedpy/core/msgenomeclassifier.py
modelseedpy/core/msgrowthphenotypes.py
modelseedpy/core/msmedia.py
modelseedpy/core/msmodel.py
modelseedpy/core/msmodelreport.py
modelseedpy/core/msmodelutl.py
modelseedpy/core/mstemplate.py
modelseedpy/core/rast_client.py
modelseedpy/core/rpcclient.py
modelseedpy/core/template.py
modelseedpy/data/ModelReportTemplate.html
modelseedpy/data/atp_medias.tsv
modelseedpy/fbapkg/__init__.py
modelseedpy/fbapkg/basefbapkg.py
modelseedpy/fbapkg/bilevelpkg.py
modelseedpy/fbapkg/changeoptpkg.py
modelseedpy/fbapkg/drainfluxpkg.py
modelseedpy/fbapkg/elementuptakepkg.py
modelseedpy/fbapkg/flexiblebiomasspkg.py
modelseedpy/fbapkg/fluxfittingpkg.py
modelseedpy/fbapkg/fullthermopkg.py
modelseedpy/fbapkg/gapfillingpkg.py
modelseedpy/fbapkg/kbasemediapkg.py
modelseedpy/fbapkg/metabofbapkg.py
modelseedpy/fbapkg/mspackagemanager.py
modelseedpy/fbapkg/objconstpkg.py
modelseedpy/fbapkg/problemreplicationpkg.py
modelseedpy/fbapkg/proteomefittingpkg.py
modelseedpy/fbapkg/reactionusepkg.py
modelseedpy/fbapkg/revbinpkg.py
modelseedpy/fbapkg/simplethermopkg.py
modelseedpy/fbapkg/totalfluxpkg.py
modelseedpy/ml/__init__.py
modelseedpy/ml/build_classifier.py
modelseedpy/ml/predict_phenotype.py
modelseedpy/multiomics/__init__.py
modelseedpy/multiomics/msexpression.py
tests/__init__.py
tests/test_data/__init__.py
tests/test_data/mock_data.py
tests/test_data/mseditorapi_testing.py