AUTHORS.rst
CONTRIBUTING.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.rst
requirements.txt
setup.cfg
setup.py
versioneer.py
docs/Makefile
docs/api_exceptions.rst
docs/api_header.rst
docs/api_io.rst
docs/api_record.rst
docs/authors.rst
docs/best_practice.rst
docs/conf.py
docs/contributing.rst
docs/examples.rst
docs/getting_started.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/license.rst
docs/make.bat
docs/modules.rst
docs/vcfpy.rst
requirements/base.txt
requirements/dev.txt
requirements/pre36.txt
requirements/test.txt
requirements/test_black.txt
tests/__init__.py
tests/conftest.py
tests/test_call.py
tests/test_context_manager.py
tests/test_fetch.py
tests/test_header.py
tests/test_header_add_lines.py
tests/test_parser_field_values.py
tests/test_parser_helpers.py
tests/test_parser_parse_header.py
tests/test_parser_parse_header_lines.py
tests/test_parser_process_alt.py
tests/test_parser_record.py
tests/test_parser_record_breakend.py
tests/test_parser_record_symbolic.py
tests/test_parser_warnings.py
tests/test_public_api.py
tests/test_reader_nosample.py
tests/test_reader_parse_subset.py
tests/test_reader_read_file.py
tests/test_reader_read_header.py
tests/test_record_base.py
tests/test_record_svs.py
tests/test_reserved_fields.py
tests/test_roundtrip.py
tests/test_vcfs_from_the_wild.py
tests/test_write_bgzf.py
tests/test_write_record.py
tests/test_writer_escape.py
tests/test_writer_write_header.py
tests/test_writer_write_reordered.py
tests/test_writer_write_subset.py
tests/vcfs/README.txt
tests/vcfs/from_vcf43.vcf
tests/vcfs/from_vcf43.vcf.gz
tests/vcfs/from_vcf43_nosamples.vcf
tests/vcfs/full_vcf43.vcf
tests/vcfs/full_vcf43.vcf.gz
tests/vcfs/full_vcf43_no_samples.vcf
tests/vcfs/multi_contig.vcf
tests/vcfs/multi_contig.vcf.gz
tests/vcfs/multi_contig.vcf.gz.tbi
tests/vcfs_from_the_wild/1kg.sites.vcf
tests/vcfs_from_the_wild/1kg.vcf.gz
tests/vcfs_from_the_wild/README.txt
tests/vcfs_from_the_wild/bcftools.vcf
tests/vcfs_from_the_wild/contig_idonly.vcf
tests/vcfs_from_the_wild/example-4.0.vcf
tests/vcfs_from_the_wild/example-4.1-info-multiple-values.vcf
tests/vcfs_from_the_wild/example-4.1-ploidy.vcf
tests/vcfs_from_the_wild/example-4.1-sv.vcf
tests/vcfs_from_the_wild/example-4.1.vcf
tests/vcfs_from_the_wild/example-4.2.vcf
tests/vcfs_from_the_wild/freebayes.vcf
tests/vcfs_from_the_wild/gatk.vcf
tests/vcfs_from_the_wild/gatk_26_meta.vcf
tests/vcfs_from_the_wild/gonl.chr20.release4.gtc.vcf
tests/vcfs_from_the_wild/info-type-character.vcf
tests/vcfs_from_the_wild/issue-140-file1.vcf
tests/vcfs_from_the_wild/issue-140-file2.vcf
tests/vcfs_from_the_wild/issue-140-file3.vcf
tests/vcfs_from_the_wild/issue-16.vcf
tests/vcfs_from_the_wild/issue-201.vcf.gz
tests/vcfs_from_the_wild/issue-201.vcf.gz.tbi
tests/vcfs_from_the_wild/issue-214.vcf
tests/vcfs_from_the_wild/issue_49.vcf
tests/vcfs_from_the_wild/metadata-whitespace.vcf
tests/vcfs_from_the_wild/mixed-filtering.vcf
tests/vcfs_from_the_wild/null_genotype_mono.vcf
tests/vcfs_from_the_wild/parse-meta-line.vcf
tests/vcfs_from_the_wild/samples-space.vcf
tests/vcfs_from_the_wild/samtools.vcf
tests/vcfs_from_the_wild/strelka.vcf
tests/vcfs_from_the_wild/string_as_flag.vcf
tests/vcfs_from_the_wild/tb.vcf.gz
tests/vcfs_from_the_wild/tb.vcf.gz.tbi
tests/vcfs_from_the_wild/uncalled_genotypes.vcf
tests/vcfs_from_the_wild/walk_left.vcf
tests/vcfs_from_the_wild/walk_refcall.vcf
vcfpy/__init__.py
vcfpy/_version.py
vcfpy/bgzf.py
vcfpy/compat.py
vcfpy/exceptions.py
vcfpy/header.py
vcfpy/parser.py
vcfpy/reader.py
vcfpy/record.py
vcfpy/writer.py
vcfpy.egg-info/PKG-INFO
vcfpy.egg-info/SOURCES.txt
vcfpy.egg-info/dependency_links.txt
vcfpy.egg-info/not-zip-safe
vcfpy.egg-info/top_level.txt